WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27C7.4.1 Sequence Name  C27C7.4.1
Length (nt)  1542   Chromosome Location  I: 11433671-11436018
Chromosome . Primary Identifier  I Chromosome Location . Start  11433671
Chromosome Location . End  11436018 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27C7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003663 nhr-73 C27C7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27C7.4 C27C7.4 981   I: 11434087-11434140

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27C7.4.1 11433671 11436018 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29803   470   I: 11433671-11434140 Caenorhabditis elegans
Exon29804   75   I: 11434188-11434262 Caenorhabditis elegans
Exon29805   202   I: 11434308-11434509 Caenorhabditis elegans
Exon29806   209   I: 11434561-11434769 Caenorhabditis elegans
Exon29807   260   I: 11435021-11435280 Caenorhabditis elegans
Exon29808   144   I: 11435326-11435469 Caenorhabditis elegans
Exon29809   182   I: 11435837-11436018 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27C7.4.1 11433671 11436018 -1

1 Sequence

Length
1542

1 Sequence Ontology Term

Identifier Name Description
transcript