WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27C7.8.1 Sequence Name  C27C7.8.1
Length (nt)  531   Chromosome Location  I: 11436782-11437407
Chromosome . Primary Identifier  I Chromosome Location . Start  11436782
Chromosome Location . End  11437407 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27C7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007770 nhr-259 C27C7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27C7.8 C27C7.8 531   I: 11436782-11436981

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27C7.8.1 11436782 11437407 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon29810   200   I: 11436782-11436981 Caenorhabditis elegans
Exon29811   277   I: 11437030-11437306 Caenorhabditis elegans
Exon29812   54   I: 11437354-11437407 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27C7.8.1 11436782 11437407 1

1 Sequence

Length
531

1 Sequence Ontology Term

Identifier Name Description
transcript