WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1a.1 Sequence Name  F15D3.1a.1
Length (nt)  11243   Chromosome Location  I: 11526918-11557851
Chromosome . Primary Identifier  I Chromosome Location . Start  11526918
Chromosome Location . End  11557851 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1a F15D3.1a 11025   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1a.1 11526918 11557851 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

47 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30037   486   I: 11526918-11527403 Caenorhabditis elegans
Exon30048   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30057   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30067   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30076   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30083   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30090   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30097   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30104   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30111   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30118   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30125   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30132   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30139   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30146   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30155   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30162   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30169   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30177   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30185   455   I: 11540739-11541193 Caenorhabditis elegans
Exon30191   75   I: 11541508-11541582 Caenorhabditis elegans
Exon30197   99   I: 11541908-11542006 Caenorhabditis elegans
Exon30203   144   I: 11542055-11542198 Caenorhabditis elegans
Exon30209   587   I: 11542614-11543200 Caenorhabditis elegans
Exon30215   163   I: 11543245-11543407 Caenorhabditis elegans
Exon30221   751   I: 11543579-11544329 Caenorhabditis elegans
Exon30227   284   I: 11544397-11544680 Caenorhabditis elegans
Exon30233   273   I: 11544835-11545107 Caenorhabditis elegans
Exon30239   111   I: 11545430-11545540 Caenorhabditis elegans
Exon30245   33   I: 11545667-11545699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1a.1 11526918 11557851 -1

1 Sequence

Length
11243

1 Sequence Ontology Term

Identifier Name Description
transcript