WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1h.1 Sequence Name  F15D3.1h.1
Length (nt)  11041   Chromosome Location  I: 11527028-11557792
Chromosome . Primary Identifier  I Chromosome Location . Start  11527028
Chromosome Location . End  11557792 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1h F15D3.1h 10992   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1h.1 11527028 11557792 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

46 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30039   376   I: 11527028-11527403 Caenorhabditis elegans
Exon30054   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30063   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30072   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30080   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30087   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30094   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30101   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30108   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30115   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30122   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30129   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30136   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30143   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30150   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30159   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30166   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30173   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30181   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30188   455   I: 11540739-11541193 Caenorhabditis elegans
Exon30194   75   I: 11541508-11541582 Caenorhabditis elegans
Exon30200   99   I: 11541908-11542006 Caenorhabditis elegans
Exon30206   144   I: 11542055-11542198 Caenorhabditis elegans
Exon30212   587   I: 11542614-11543200 Caenorhabditis elegans
Exon30218   163   I: 11543245-11543407 Caenorhabditis elegans
Exon30224   751   I: 11543579-11544329 Caenorhabditis elegans
Exon30230   284   I: 11544397-11544680 Caenorhabditis elegans
Exon30236   273   I: 11544835-11545107 Caenorhabditis elegans
Exon30242   111   I: 11545430-11545540 Caenorhabditis elegans
Exon30251   84   I: 11546118-11546201 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1h.1 11527028 11557792 -1

1 Sequence

Length
11041

1 Sequence Ontology Term

Identifier Name Description
transcript