WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1e.1 Sequence Name  F15D3.1e.1
Length (nt)  4734   Chromosome Location  I: 11527077-11541127
Chromosome . Primary Identifier  I Chromosome Location . Start  11527077
Chromosome Location . End  11541127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1e F15D3.1e 4734   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1e.1 11527077 11541127 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30042   327   I: 11527077-11527403 Caenorhabditis elegans
Exon30052   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30061   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30071   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30079   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30086   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30093   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30100   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30107   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30114   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30121   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30128   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30135   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30142   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30149   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30158   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30165   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30172   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30180   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30184   389   I: 11540739-11541127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1e.1 11527077 11541127 -1

1 Sequence

Length
4734

1 Sequence Ontology Term

Identifier Name Description
transcript