WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1d.1 Sequence Name  F15D3.1d.1
Length (nt)  7548   Chromosome Location  I: 11527077-11546567
Chromosome . Primary Identifier  I Chromosome Location . Start  11527077
Chromosome Location . End  11546567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1d F15D3.1d 7548   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1d.1 11527077 11546567 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30043   327   I: 11527077-11527403 Caenorhabditis elegans
Exon30051   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30060   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30070   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30078   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30085   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30092   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30099   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30106   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30113   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30120   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30127   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30134   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30141   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30148   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30157   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30164   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30171   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30179   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30187   455   I: 11540739-11541193 Caenorhabditis elegans
Exon30193   75   I: 11541508-11541582 Caenorhabditis elegans
Exon30199   99   I: 11541908-11542006 Caenorhabditis elegans
Exon30205   144   I: 11542055-11542198 Caenorhabditis elegans
Exon30211   587   I: 11542614-11543200 Caenorhabditis elegans
Exon30217   163   I: 11543245-11543407 Caenorhabditis elegans
Exon30223   751   I: 11543579-11544329 Caenorhabditis elegans
Exon30229   284   I: 11544397-11544680 Caenorhabditis elegans
Exon30235   273   I: 11544835-11545107 Caenorhabditis elegans
Exon30241   111   I: 11545430-11545540 Caenorhabditis elegans
Exon30247   33   I: 11545667-11545699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1d.1 11527077 11546567 -1

1 Sequence

Length
7548

1 Sequence Ontology Term

Identifier Name Description
transcript