WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1j.1 Sequence Name  F15D3.1j.1
Length (nt)  9665   Chromosome Location  I: 11527077-11550600
Chromosome . Primary Identifier  I Chromosome Location . Start  11527077
Chromosome Location . End  11550600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1j F15D3.1j 7515   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1j.1 11527077 11550600 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

39 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30044   327   I: 11527077-11527403 Caenorhabditis elegans
Exon30056   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30065   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30074   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30082   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30089   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30096   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30103   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30110   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30117   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30124   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30131   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30138   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30145   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30152   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30161   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30168   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30175   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30183   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30190   455   I: 11540739-11541193 Caenorhabditis elegans
Exon30196   75   I: 11541508-11541582 Caenorhabditis elegans
Exon30202   99   I: 11541908-11542006 Caenorhabditis elegans
Exon30208   144   I: 11542055-11542198 Caenorhabditis elegans
Exon30214   587   I: 11542614-11543200 Caenorhabditis elegans
Exon30220   163   I: 11543245-11543407 Caenorhabditis elegans
Exon30226   751   I: 11543579-11544329 Caenorhabditis elegans
Exon30232   284   I: 11544397-11544680 Caenorhabditis elegans
Exon30238   273   I: 11544835-11545107 Caenorhabditis elegans
Exon30244   111   I: 11545430-11545540 Caenorhabditis elegans
Exon30253   84   I: 11546118-11546201 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1j.1 11527077 11550600 -1

1 Sequence

Length
9665

1 Sequence Ontology Term

Identifier Name Description
transcript