WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1c.1 Sequence Name  F15D3.1c.1
Length (nt)  10347   Chromosome Location  I: 11527077-11552106
Chromosome . Primary Identifier  I Chromosome Location . Start  11527077
Chromosome Location . End  11552106 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1c F15D3.1c 10347   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1c.1 11527077 11552106 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

43 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30045   327   I: 11527077-11527403 Caenorhabditis elegans
Exon30050   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30059   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30069   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30077   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30084   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30091   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30098   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30105   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30112   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30119   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30126   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30133   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30140   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30147   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30156   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30163   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30170   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30178   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30186   455   I: 11540739-11541193 Caenorhabditis elegans
Exon30192   75   I: 11541508-11541582 Caenorhabditis elegans
Exon30198   99   I: 11541908-11542006 Caenorhabditis elegans
Exon30204   144   I: 11542055-11542198 Caenorhabditis elegans
Exon30210   587   I: 11542614-11543200 Caenorhabditis elegans
Exon30216   163   I: 11543245-11543407 Caenorhabditis elegans
Exon30222   751   I: 11543579-11544329 Caenorhabditis elegans
Exon30228   284   I: 11544397-11544680 Caenorhabditis elegans
Exon30234   273   I: 11544835-11545107 Caenorhabditis elegans
Exon30240   111   I: 11545430-11545540 Caenorhabditis elegans
Exon30246   33   I: 11545667-11545699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1c.1 11527077 11552106 -1

1 Sequence

Length
10347

1 Sequence Ontology Term

Identifier Name Description
transcript