WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.1i.1 Sequence Name  F15D3.1i.1
Length (nt)  10314   Chromosome Location  I: 11527077-11552106
Chromosome . Primary Identifier  I Chromosome Location . Start  11527077
Chromosome Location . End  11552106 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001131 dys-1 F15D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.1i F15D3.1i 10314   I: 11527077-11527403

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1i.1 11527077 11552106 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

42 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30046   327   I: 11527077-11527403 Caenorhabditis elegans
Exon30055   126   I: 11528157-11528282 Caenorhabditis elegans
Exon30064   112   I: 11528452-11528563 Caenorhabditis elegans
Exon30073   122   I: 11528953-11529074 Caenorhabditis elegans
Exon30081   180   I: 11530284-11530463 Caenorhabditis elegans
Exon30088   249   I: 11530984-11531232 Caenorhabditis elegans
Exon30095   69   I: 11531952-11532020 Caenorhabditis elegans
Exon30102   132   I: 11532065-11532196 Caenorhabditis elegans
Exon30109   77   I: 11532292-11532368 Caenorhabditis elegans
Exon30116   86   I: 11532421-11532506 Caenorhabditis elegans
Exon30123   342   I: 11533267-11533608 Caenorhabditis elegans
Exon30130   159   I: 11534132-11534290 Caenorhabditis elegans
Exon30137   397   I: 11534374-11534770 Caenorhabditis elegans
Exon30144   296   I: 11536160-11536455 Caenorhabditis elegans
Exon30151   363   I: 11536784-11537146 Caenorhabditis elegans
Exon30160   356   I: 11537845-11538200 Caenorhabditis elegans
Exon30167   432   I: 11538587-11539018 Caenorhabditis elegans
Exon30174   120   I: 11539068-11539187 Caenorhabditis elegans
Exon30182   400   I: 11539815-11540214 Caenorhabditis elegans
Exon30189   455   I: 11540739-11541193 Caenorhabditis elegans
Exon30195   75   I: 11541508-11541582 Caenorhabditis elegans
Exon30201   99   I: 11541908-11542006 Caenorhabditis elegans
Exon30207   144   I: 11542055-11542198 Caenorhabditis elegans
Exon30213   587   I: 11542614-11543200 Caenorhabditis elegans
Exon30219   163   I: 11543245-11543407 Caenorhabditis elegans
Exon30225   751   I: 11543579-11544329 Caenorhabditis elegans
Exon30231   284   I: 11544397-11544680 Caenorhabditis elegans
Exon30237   273   I: 11544835-11545107 Caenorhabditis elegans
Exon30243   111   I: 11545430-11545540 Caenorhabditis elegans
Exon30252   84   I: 11546118-11546201 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.1i.1 11527077 11552106 -1

1 Sequence

Length
10314

1 Sequence Ontology Term

Identifier Name Description
transcript