WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15D3.4.1 Sequence Name  F15D3.4.1
Length (nt)  2592   Chromosome Location  I: 11565189-11570871
Chromosome . Primary Identifier  I Chromosome Location . Start  11565189
Chromosome Location . End  11570871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15D3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008854 F15D3.4 F15D3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15D3.4 F15D3.4 2472   I: 11565241-11565336

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.4.1 11565189 11570871 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30329   148   I: 11565189-11565336 Caenorhabditis elegans
Exon30330   111   I: 11565515-11565625 Caenorhabditis elegans
Exon30331   95   I: 11565672-11565766 Caenorhabditis elegans
Exon30332   73   I: 11566332-11566404 Caenorhabditis elegans
Exon30333   96   I: 11566584-11566679 Caenorhabditis elegans
Exon30334   309   I: 11566728-11567036 Caenorhabditis elegans
Exon30335   256   I: 11567199-11567454 Caenorhabditis elegans
Exon30338   228   I: 11568046-11568273 Caenorhabditis elegans
Exon30339   263   I: 11568320-11568582 Caenorhabditis elegans
Exon30340   269   I: 11568629-11568897 Caenorhabditis elegans
Exon30341   425   I: 11569341-11569765 Caenorhabditis elegans
Exon30342   132   I: 11569987-11570118 Caenorhabditis elegans
Exon30343   89   I: 11570165-11570253 Caenorhabditis elegans
Exon30344   98   I: 11570774-11570871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15D3.4.1 11565189 11570871 1

1 Sequence

Length
2592

1 Sequence Ontology Term

Identifier Name Description
transcript