WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17D12.6b.1 Sequence Name  C17D12.6b.1
Length (nt)  1143   Chromosome Location  I: 11582759-11584478
Chromosome . Primary Identifier  I Chromosome Location . Start  11582759
Chromosome Location . End  11584478 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17D12.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004963 spe-9 C17D12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17D12.6b C17D12.6b 1143   I: 11582759-11582902

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17D12.6b.1 11582759 11584478 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30338   144   I: 11582759-11582902 Caenorhabditis elegans
Exon30340   143   I: 11582950-11583092 Caenorhabditis elegans
Exon30342   68   I: 11583143-11583210 Caenorhabditis elegans
Exon30344   177   I: 11583259-11583435 Caenorhabditis elegans
Exon30346   161   I: 11583490-11583650 Caenorhabditis elegans
Exon30348   85   I: 11583694-11583778 Caenorhabditis elegans
Exon30350   199   I: 11583827-11584025 Caenorhabditis elegans
Exon30355   140   I: 11584270-11584409 Caenorhabditis elegans
Exon30356   26   I: 11584453-11584478 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17D12.6b.1 11582759 11584478 -1

1 Sequence

Length
1143

1 Sequence Ontology Term

Identifier Name Description
transcript