WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17D12.6a.1 Sequence Name  C17D12.6a.1
Length (nt)  2024   Chromosome Location  I: 11582743-11586069
Chromosome . Primary Identifier  I Chromosome Location . Start  11582743
Chromosome Location . End  11586069 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17D12.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004963 spe-9 C17D12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17D12.6a C17D12.6a 1986   I: 11582759-11582902

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17D12.6a.1 11582743 11586069 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30363   160   I: 11582743-11582902 Caenorhabditis elegans
Exon30365   143   I: 11582950-11583092 Caenorhabditis elegans
Exon30367   68   I: 11583143-11583210 Caenorhabditis elegans
Exon30369   177   I: 11583259-11583435 Caenorhabditis elegans
Exon30371   161   I: 11583490-11583650 Caenorhabditis elegans
Exon30373   85   I: 11583694-11583778 Caenorhabditis elegans
Exon30375   199   I: 11583827-11584025 Caenorhabditis elegans
Exon30380   140   I: 11584270-11584409 Caenorhabditis elegans
Exon30383   106   I: 11584453-11584558 Caenorhabditis elegans
Exon30384   67   I: 11584616-11584682 Caenorhabditis elegans
Exon30386   75   I: 11584912-11584986 Caenorhabditis elegans
Exon30387   289   I: 11585037-11585325 Caenorhabditis elegans
Exon30390   108   I: 11585546-11585653 Caenorhabditis elegans
Exon30391   77   I: 11585701-11585777 Caenorhabditis elegans
Exon30392   101   I: 11585840-11585940 Caenorhabditis elegans
Exon30393   68   I: 11586002-11586069 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17D12.6a.1 11582743 11586069 -1

1 Sequence

Length
2024

1 Sequence Ontology Term

Identifier Name Description
transcript