WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C17D12.3.1 Sequence Name  C17D12.3.1
Length (nt)  1257   Chromosome Location  I: 11616816-11620263
Chromosome . Primary Identifier  I Chromosome Location . Start  11616816
Chromosome Location . End  11620263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17D12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007638 C17D12.3 C17D12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17D12.3 C17D12.3 1257   I: 11616816-11616826

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17D12.3.1 11616816 11620263 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30431   11   I: 11616816-11616826 Caenorhabditis elegans
Exon30432   88   I: 11617111-11617198 Caenorhabditis elegans
Exon30433   72   I: 11617249-11617320 Caenorhabditis elegans
Exon30434   135   I: 11617642-11617776 Caenorhabditis elegans
Exon30435   248   I: 11617831-11618078 Caenorhabditis elegans
Exon30436   97   I: 11618905-11619001 Caenorhabditis elegans
Exon30437   72   I: 11619050-11619121 Caenorhabditis elegans
Exon30438   126   I: 11619172-11619297 Caenorhabditis elegans
Exon30439   227   I: 11619736-11619962 Caenorhabditis elegans
Exon30440   128   I: 11620016-11620143 Caenorhabditis elegans
Exon30441   53   I: 11620211-11620263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17D12.3.1 11616816 11620263 -1

1 Sequence

Length
1257

1 Sequence Ontology Term

Identifier Name Description
transcript