WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47H9A.1.1 Sequence Name  Y47H9A.1.1
Length (nt)  1257   Chromosome Location  I: 11623115-11626562
Chromosome . Primary Identifier  I Chromosome Location . Start  11623115
Chromosome Location . End  11626562 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012945 Y47H9A.1 Y47H9A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H9A.1 Y47H9A.1 1257   I: 11623115-11623167

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9A.1.1 11623115 11626562 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30446   53   I: 11623115-11623167 Caenorhabditis elegans
Exon30447   128   I: 11623235-11623362 Caenorhabditis elegans
Exon30448   227   I: 11623416-11623642 Caenorhabditis elegans
Exon30449   126   I: 11624081-11624206 Caenorhabditis elegans
Exon30450   72   I: 11624257-11624328 Caenorhabditis elegans
Exon30451   97   I: 11624377-11624473 Caenorhabditis elegans
Exon30452   248   I: 11625300-11625547 Caenorhabditis elegans
Exon30453   135   I: 11625602-11625736 Caenorhabditis elegans
Exon30454   72   I: 11626058-11626129 Caenorhabditis elegans
Exon30455   88   I: 11626180-11626267 Caenorhabditis elegans
Exon30456   11   I: 11626552-11626562 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9A.1.1 11623115 11626562 1

1 Sequence

Length
1257

1 Sequence Ontology Term

Identifier Name Description
transcript