WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17D12.3.1 Sequence Name  C17D12.3.1
Length (nt)  1257   Chromosome Location  I: 11616816-11620263
Chromosome . Primary Identifier  I Chromosome Location . Start  11616816
Chromosome Location . End  11620263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17D12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007638 C17D12.3 C17D12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17D12.3 C17D12.3 1257   I: 11616816-11616826

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17D12.3.1 11616816 11620263 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30457   11   I: 11616816-11616826 Caenorhabditis elegans
Exon30458   88   I: 11617111-11617198 Caenorhabditis elegans
Exon30459   72   I: 11617249-11617320 Caenorhabditis elegans
Exon30460   135   I: 11617642-11617776 Caenorhabditis elegans
Exon30461   248   I: 11617831-11618078 Caenorhabditis elegans
Exon30462   97   I: 11618905-11619001 Caenorhabditis elegans
Exon30463   72   I: 11619050-11619121 Caenorhabditis elegans
Exon30464   126   I: 11619172-11619297 Caenorhabditis elegans
Exon30465   227   I: 11619736-11619962 Caenorhabditis elegans
Exon30466   128   I: 11620016-11620143 Caenorhabditis elegans
Exon30467   53   I: 11620211-11620263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17D12.3.1 11616816 11620263 -1

1 Sequence

Length
1257

1 Sequence Ontology Term

Identifier Name Description
transcript