WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04G5.5.1 Sequence Name  W04G5.5.1
Length (nt)  1239   Chromosome Location  I: 11634613-11636910
Chromosome . Primary Identifier  I Chromosome Location . Start  11634613
Chromosome Location . End  11636910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04G5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012266 W04G5.5 W04G5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04G5.5 W04G5.5 1239   I: 11634613-11634668

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04G5.5.1 11634613 11636910 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30478   56   I: 11634613-11634668 Caenorhabditis elegans
Exon30479   128   I: 11634810-11634937 Caenorhabditis elegans
Exon30480   236   I: 11635275-11635510 Caenorhabditis elegans
Exon30481   123   I: 11635558-11635680 Caenorhabditis elegans
Exon30482   72   I: 11635728-11635799 Caenorhabditis elegans
Exon30483   88   I: 11635847-11635934 Caenorhabditis elegans
Exon30484   236   I: 11636143-11636378 Caenorhabditis elegans
Exon30485   126   I: 11636426-11636551 Caenorhabditis elegans
Exon30486   72   I: 11636596-11636667 Caenorhabditis elegans
Exon30487   88   I: 11636720-11636807 Caenorhabditis elegans
Exon30488   14   I: 11636897-11636910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04G5.5.1 11634613 11636910 1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
transcript