WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04G5.9.1 Sequence Name  W04G5.9.1
Length (nt)  1224   Chromosome Location  I: 11643021-11645420
Chromosome . Primary Identifier  I Chromosome Location . Start  11643021
Chromosome Location . End  11645420 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04G5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012269 W04G5.9 W04G5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04G5.9 W04G5.9 1224   I: 11643021-11643123

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04G5.9.1 11643021 11645420 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30509   103   I: 11643021-11643123 Caenorhabditis elegans
Exon30510   90   I: 11643172-11643261 Caenorhabditis elegans
Exon30511   75   I: 11643307-11643381 Caenorhabditis elegans
Exon30512   81   I: 11643449-11643529 Caenorhabditis elegans
Exon30513   39   I: 11643637-11643675 Caenorhabditis elegans
Exon30514   69   I: 11643720-11643788 Caenorhabditis elegans
Exon30515   81   I: 11644255-11644335 Caenorhabditis elegans
Exon30516   78   I: 11644408-11644485 Caenorhabditis elegans
Exon30517   78   I: 11644590-11644667 Caenorhabditis elegans
Exon30518   236   I: 11644758-11644993 Caenorhabditis elegans
Exon30519   123   I: 11645039-11645161 Caenorhabditis elegans
Exon30520   72   I: 11645206-11645277 Caenorhabditis elegans
Exon30521   99   I: 11645322-11645420 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04G5.9.1 11643021 11645420 1

1 Sequence

Length
1224

1 Sequence Ontology Term

Identifier Name Description
transcript