WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11A6.1a.2 Sequence Name  F11A6.1a.2
Length (nt)  2303   Chromosome Location  I: 11675941-11680752
Chromosome . Primary Identifier  I Chromosome Location . Start  11675941
Chromosome Location . End  11680752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A6.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002232 kpc-1 F11A6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A6.1a F11A6.1a 2079   I: 11676045-11676308

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11A6.1a.2 11675941 11680752 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30558   368   I: 11675941-11676308 Caenorhabditis elegans
Exon30562   291   I: 11676795-11677085 Caenorhabditis elegans
Exon30565   401   I: 11677840-11678240 Caenorhabditis elegans
Exon30569   624   I: 11678837-11679460 Caenorhabditis elegans
Exon30572   164   I: 11679929-11680092 Caenorhabditis elegans
Exon30574   144   I: 11680240-11680383 Caenorhabditis elegans
Exon30577   311   I: 11680442-11680752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11A6.1a.2 11675941 11680752 1

1 Sequence

Length
2303

1 Sequence Ontology Term

Identifier Name Description
transcript