WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11A6.2.1 Sequence Name  F11A6.2.1
Length (nt)  994   Chromosome Location  I: 11680899-11682441
Chromosome . Primary Identifier  I Chromosome Location . Start  11680899
Chromosome Location . End  11682441 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008681 scrm-4 F11A6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A6.2 F11A6.2 783   I: 11681033-11681067

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11A6.2.1 11680899 11682441 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30579   169   I: 11680899-11681067 Caenorhabditis elegans
Exon30580   58   I: 11681124-11681181 Caenorhabditis elegans
Exon30581   65   I: 11681226-11681290 Caenorhabditis elegans
Exon30582   100   I: 11681334-11681433 Caenorhabditis elegans
Exon30583   249   I: 11681625-11681873 Caenorhabditis elegans
Exon30584   353   I: 11682089-11682441 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11A6.2.1 11680899 11682441 -1

1 Sequence

Length
994

1 Sequence Ontology Term

Identifier Name Description
transcript