WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22H2.3.1 Sequence Name  T22H2.3.1
Length (nt)  1647   Chromosome Location  I: 11694577-11697943
Chromosome . Primary Identifier  I Chromosome Location . Start  11694577
Chromosome Location . End  11697943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22H2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005523 sri-11 T22H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22H2.3 T22H2.3 1050   I: 11695681-11695786

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22H2.3.1 11694577 11697943 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30614   255   I: 11694577-11694831 Caenorhabditis elegans
Exon30616   448   I: 11695339-11695786 Caenorhabditis elegans
Exon30617   121   I: 11695846-11695966 Caenorhabditis elegans
Exon30618   197   I: 11696012-11696208 Caenorhabditis elegans
Exon30619   122   I: 11696766-11696887 Caenorhabditis elegans
Exon30620   129   I: 11696936-11697064 Caenorhabditis elegans
Exon30621   216   I: 11697110-11697325 Caenorhabditis elegans
Exon30622   159   I: 11697785-11697943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22H2.3.1 11694577 11697943 -1

1 Sequence

Length
1647

1 Sequence Ontology Term

Identifier Name Description
transcript