WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35E2.6.1 Sequence Name  F35E2.6.1
Length (nt)  2168   Chromosome Location  I: 11707808-11712197
Chromosome . Primary Identifier  I Chromosome Location . Start  11707808
Chromosome Location . End  11712197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35E2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009413 oac-19 F35E2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35E2.6 F35E2.6 2097   I: 11707879-11708142

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35E2.6.1 11707808 11712197 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30675   335   I: 11707808-11708142 Caenorhabditis elegans
Exon30676   211   I: 11708200-11708410 Caenorhabditis elegans
Exon30677   112   I: 11708457-11708568 Caenorhabditis elegans
Exon30678   127   I: 11708619-11708745 Caenorhabditis elegans
Exon30680   377   I: 11709306-11709682 Caenorhabditis elegans
Exon30681   167   I: 11709726-11709892 Caenorhabditis elegans
Exon30682   214   I: 11710310-11710523 Caenorhabditis elegans
Exon30683   87   I: 11711423-11711509 Caenorhabditis elegans
Exon30684   139   I: 11711556-11711694 Caenorhabditis elegans
Exon30685   265   I: 11711748-11712012 Caenorhabditis elegans
Exon30686   134   I: 11712064-11712197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35E2.6.1 11707808 11712197 -1

1 Sequence

Length
2168

1 Sequence Ontology Term

Identifier Name Description
transcript