WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK1151.1o Sequence Name  ZK1151.1o
Length (nt)  10353   Chromosome Location  I: 11747762-11747801
Chromosome . Primary Identifier  I Chromosome Location . Start  11747762
Chromosome Location . End  11747801
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1151.1o

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19338 VAB-10, isoform o 386.8 3450 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00089769
WBRNAi00004911
WBRNAi00027038
WBRNAi00027039
WBRNAi00059148
WBRNAi00080609
WBRNAi00035367
WBRNAi00022650
WBRNAi00065779
WBRNAi00059147
WBRNAi00089903
WBRNAi00090063
WBRNAi00090221
WBRNAi00090382
WBRNAi00090429
WBRNAi00090476
WBRNAi00090523

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK1151.1o 11747762 11747801 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK1151.1o 11747762 11747801 -1
CDS:ZK1151.1o 11747897 11748100 -1
CDS:ZK1151.1o 11748176 11748513 -1
CDS:ZK1151.1o 11748569 11748688 -1
CDS:ZK1151.1o 11748745 11748857 -1
CDS:ZK1151.1o 11749275 11750975 -1
CDS:ZK1151.1o 11751032 11751933 -1
CDS:ZK1151.1o 11751993 11755150 -1
CDS:ZK1151.1o 11756603 11757066 -1
CDS:ZK1151.1o 11757126 11758168 -1
CDS:ZK1151.1o 11758224 11759683 -1
CDS:ZK1151.1o 11759733 11760542 -1

1 Sequence

Length
10353

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1151.1o.1 ZK1151.1o.1 10353   I: 11747762-11760542