WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1151.1j.1 Sequence Name  ZK1151.1j.1
Length (nt)  15137   Chromosome Location  I: 11747424-11792066
Chromosome . Primary Identifier  I Chromosome Location . Start  11747424
Chromosome Location . End  11792066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1151.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1j ZK1151.1j 14799   I: 11747762-11747801

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1j.1 11747424 11792066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30754   378   I: 11747424-11747801 Caenorhabditis elegans
Exon30762   204   I: 11747897-11748100 Caenorhabditis elegans
Exon30769   338   I: 11748176-11748513 Caenorhabditis elegans
Exon30776   120   I: 11748569-11748688 Caenorhabditis elegans
Exon30783   113   I: 11748745-11748857 Caenorhabditis elegans
Exon30791   1701   I: 11749275-11750975 Caenorhabditis elegans
Exon30798   902   I: 11751032-11751933 Caenorhabditis elegans
Exon30805   3158   I: 11751993-11755150 Caenorhabditis elegans
Exon30812   464   I: 11756603-11757066 Caenorhabditis elegans
Exon30819   1043   I: 11757126-11758168 Caenorhabditis elegans
Exon30826   1460   I: 11758224-11759683 Caenorhabditis elegans
Exon30834   862   I: 11759733-11760594 Caenorhabditis elegans
Exon30840   188   I: 11761820-11762007 Caenorhabditis elegans
Exon30847   150   I: 11762100-11762249 Caenorhabditis elegans
Exon30870   96   I: 11773418-11773513 Caenorhabditis elegans
Exon30883   463   I: 11774150-11774612 Caenorhabditis elegans
Exon30895   86   I: 11774706-11774791 Caenorhabditis elegans
Exon30907   153   I: 11774872-11775024 Caenorhabditis elegans
Exon30919   511   I: 11775073-11775583 Caenorhabditis elegans
Exon30931   1529   I: 11775642-11777170 Caenorhabditis elegans
Exon30942   339   I: 11777360-11777698 Caenorhabditis elegans
Exon30952   189   I: 11777952-11778140 Caenorhabditis elegans
Exon30964   117   I: 11779553-11779669 Caenorhabditis elegans
Exon30976   63   I: 11780571-11780633 Caenorhabditis elegans
Exon30990   177   I: 11787762-11787938 Caenorhabditis elegans
Exon30999   78   I: 11788650-11788727 Caenorhabditis elegans
Exon31008   90   I: 11788797-11788886 Caenorhabditis elegans
Exon31017   62   I: 11789181-11789242 Caenorhabditis elegans
Exon31022   103   I: 11791964-11792066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1j.1 11747424 11792066 -1

1 Sequence

Length
15137

1 Sequence Ontology Term

Identifier Name Description
transcript