WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1151.1m.1 Sequence Name  ZK1151.1m.1
Length (nt)  14841   Chromosome Location  I: 11747762-11783939
Chromosome . Primary Identifier  I Chromosome Location . Start  11747762
Chromosome Location . End  11783939 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1151.1m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1m ZK1151.1m 14841   I: 11747762-11747801

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1m.1 11747762 11783939 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30759   40   I: 11747762-11747801 Caenorhabditis elegans
Exon30765   204   I: 11747897-11748100 Caenorhabditis elegans
Exon30772   338   I: 11748176-11748513 Caenorhabditis elegans
Exon30779   120   I: 11748569-11748688 Caenorhabditis elegans
Exon30786   113   I: 11748745-11748857 Caenorhabditis elegans
Exon30794   1701   I: 11749275-11750975 Caenorhabditis elegans
Exon30801   902   I: 11751032-11751933 Caenorhabditis elegans
Exon30808   3158   I: 11751993-11755150 Caenorhabditis elegans
Exon30815   464   I: 11756603-11757066 Caenorhabditis elegans
Exon30822   1043   I: 11757126-11758168 Caenorhabditis elegans
Exon30829   1460   I: 11758224-11759683 Caenorhabditis elegans
Exon30837   862   I: 11759733-11760594 Caenorhabditis elegans
Exon30843   188   I: 11761820-11762007 Caenorhabditis elegans
Exon30850   150   I: 11762100-11762249 Caenorhabditis elegans
Exon30873   96   I: 11773418-11773513 Caenorhabditis elegans
Exon30886   463   I: 11774150-11774612 Caenorhabditis elegans
Exon30898   86   I: 11774706-11774791 Caenorhabditis elegans
Exon30910   153   I: 11774872-11775024 Caenorhabditis elegans
Exon30922   511   I: 11775073-11775583 Caenorhabditis elegans
Exon30934   1529   I: 11775642-11777170 Caenorhabditis elegans
Exon30955   189   I: 11777952-11778140 Caenorhabditis elegans
Exon30967   117   I: 11779553-11779669 Caenorhabditis elegans
Exon30979   63   I: 11780571-11780633 Caenorhabditis elegans
Exon30982   891   I: 11783049-11783939 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1m.1 11747762 11783939 -1

1 Sequence

Length
14841

1 Sequence Ontology Term

Identifier Name Description
transcript