WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1151.1h.1 Sequence Name  ZK1151.1h.1
Length (nt)  10275   Chromosome Location  I: 11764837-11792066
Chromosome . Primary Identifier  I Chromosome Location . Start  11764837
Chromosome Location . End  11792066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1151.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1h ZK1151.1h 10275   I: 11764837-11770713

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1h.1 11764837 11792066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30853   5877   I: 11764837-11770713 Caenorhabditis elegans
Exon30861   342   I: 11770992-11771333 Caenorhabditis elegans
Exon30869   96   I: 11773418-11773513 Caenorhabditis elegans
Exon30881   463   I: 11774150-11774612 Caenorhabditis elegans
Exon30893   86   I: 11774706-11774791 Caenorhabditis elegans
Exon30905   153   I: 11774872-11775024 Caenorhabditis elegans
Exon30917   511   I: 11775073-11775583 Caenorhabditis elegans
Exon30929   1529   I: 11775642-11777170 Caenorhabditis elegans
Exon30940   339   I: 11777360-11777698 Caenorhabditis elegans
Exon30950   189   I: 11777952-11778140 Caenorhabditis elegans
Exon30962   117   I: 11779553-11779669 Caenorhabditis elegans
Exon30974   63   I: 11780571-11780633 Caenorhabditis elegans
Exon30989   177   I: 11787762-11787938 Caenorhabditis elegans
Exon30998   78   I: 11788650-11788727 Caenorhabditis elegans
Exon31007   90   I: 11788797-11788886 Caenorhabditis elegans
Exon31016   62   I: 11789181-11789242 Caenorhabditis elegans
Exon31021   103   I: 11791964-11792066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1h.1 11764837 11792066 -1

1 Sequence

Length
10275

1 Sequence Ontology Term

Identifier Name Description
transcript