WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1151.1e.1 Sequence Name  ZK1151.1e.1
Length (nt)  9995   Chromosome Location  I: 11764837-11792125
Chromosome . Primary Identifier  I Chromosome Location . Start  11764837
Chromosome Location . End  11792125 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1151.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1e ZK1151.1e 9936   I: 11764837-11770713

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1e.1 11764837 11792125 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30854   5877   I: 11764837-11770713 Caenorhabditis elegans
Exon30860   342   I: 11770992-11771333 Caenorhabditis elegans
Exon30867   96   I: 11773418-11773513 Caenorhabditis elegans
Exon30879   463   I: 11774150-11774612 Caenorhabditis elegans
Exon30891   86   I: 11774706-11774791 Caenorhabditis elegans
Exon30903   153   I: 11774872-11775024 Caenorhabditis elegans
Exon30915   511   I: 11775073-11775583 Caenorhabditis elegans
Exon30927   1529   I: 11775642-11777170 Caenorhabditis elegans
Exon30948   189   I: 11777952-11778140 Caenorhabditis elegans
Exon30960   117   I: 11779553-11779669 Caenorhabditis elegans
Exon30972   63   I: 11780571-11780633 Caenorhabditis elegans
Exon30987   177   I: 11787762-11787938 Caenorhabditis elegans
Exon30996   78   I: 11788650-11788727 Caenorhabditis elegans
Exon31005   90   I: 11788797-11788886 Caenorhabditis elegans
Exon31014   62   I: 11789181-11789242 Caenorhabditis elegans
Exon31025   162   I: 11791964-11792125 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1e.1 11764837 11792125 -1

1 Sequence

Length
9995

1 Sequence Ontology Term

Identifier Name Description
transcript