WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1151.1a.1 Sequence Name  ZK1151.1a.1
Length (nt)  11085   Chromosome Location  I: 11764837-11804991
Chromosome . Primary Identifier  I Chromosome Location . Start  11764837
Chromosome Location . End  11804991 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1151.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1a ZK1151.1a 11085   I: 11764837-11770713

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1a.1 11764837 11804991 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30856   5877   I: 11764837-11770713 Caenorhabditis elegans
Exon30857   342   I: 11770992-11771333 Caenorhabditis elegans
Exon30863   96   I: 11773418-11773513 Caenorhabditis elegans
Exon30875   463   I: 11774150-11774612 Caenorhabditis elegans
Exon30887   86   I: 11774706-11774791 Caenorhabditis elegans
Exon30899   153   I: 11774872-11775024 Caenorhabditis elegans
Exon30911   511   I: 11775073-11775583 Caenorhabditis elegans
Exon30923   1529   I: 11775642-11777170 Caenorhabditis elegans
Exon30935   339   I: 11777360-11777698 Caenorhabditis elegans
Exon30944   189   I: 11777952-11778140 Caenorhabditis elegans
Exon30956   117   I: 11779553-11779669 Caenorhabditis elegans
Exon30968   63   I: 11780571-11780633 Caenorhabditis elegans
Exon30984   177   I: 11787762-11787938 Caenorhabditis elegans
Exon30992   78   I: 11788650-11788727 Caenorhabditis elegans
Exon31001   90   I: 11788797-11788886 Caenorhabditis elegans
Exon31010   62   I: 11789181-11789242 Caenorhabditis elegans
Exon31029   125   I: 11800624-11800748 Caenorhabditis elegans
Exon31030   75   I: 11801339-11801413 Caenorhabditis elegans
Exon31031   129   I: 11801652-11801780 Caenorhabditis elegans
Exon31032   276   I: 11802349-11802624 Caenorhabditis elegans
Exon31035   131   I: 11803833-11803963 Caenorhabditis elegans
Exon31036   177   I: 11804815-11804991 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1a.1 11764837 11804991 -1

1 Sequence

Length
11085

1 Sequence Ontology Term

Identifier Name Description
transcript