WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47H9C.2.1 Sequence Name  Y47H9C.2.1
Length (nt)  1443   Chromosome Location  I: 11836460-11849258
Chromosome . Primary Identifier  I Chromosome Location . Start  11836460
Chromosome Location . End  11849258 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9C.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012948 dhhc-2 Y47H9C.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H9C.2 Y47H9C.2 1215   I: 11836590-11836625

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9C.2.1 11836460 11849258 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31064   166   I: 11836460-11836625 Caenorhabditis elegans
Exon31066   64   I: 11842618-11842681 Caenorhabditis elegans
Exon31067   256   I: 11844741-11844996 Caenorhabditis elegans
Exon31068   176   I: 11845395-11845570 Caenorhabditis elegans
Exon31069   156   I: 11845621-11845776 Caenorhabditis elegans
Exon31070   120   I: 11847044-11847163 Caenorhabditis elegans
Exon31071   85   I: 11847371-11847455 Caenorhabditis elegans
Exon31072   67   I: 11847515-11847581 Caenorhabditis elegans
Exon31073   164   I: 11847733-11847896 Caenorhabditis elegans
Exon31074   189   I: 11849070-11849258 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9C.2.1 11836460 11849258 1

1 Sequence

Length
1443

1 Sequence Ontology Term

Identifier Name Description
transcript