WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47H9C.5a Sequence Name  Y47H9C.5a
Length (nt)  2367   Chromosome Location  I: 11877806-11877964
Chromosome . Primary Identifier  I Chromosome Location . Start  11877806
Chromosome Location . End  11877964
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9C.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20265 DNJ-27, isoform a 90.8 788 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00056850
WBRNAi00058311
WBRNAi00106342
WBRNAi00037210
WBRNAi00108398
WBRNAi00108379
WBRNAi00108375
WBRNAi00108378

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47H9C.5a 11877806 11877964 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47H9C.5a 11877806 11877964 1
CDS:Y47H9C.5a 11878377 11878682 1
CDS:Y47H9C.5a 11879784 11880106 1
CDS:Y47H9C.5a 11880425 11880672 1
CDS:Y47H9C.5a 11884098 11884456 1
CDS:Y47H9C.5a 11885017 11885561 1
CDS:Y47H9C.5a 11886721 11887147 1

1 Sequence

Length
2367

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47H9C.5a.1 Y47H9C.5a.1 2501   I: 11877803-11887278