WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47H9C.8.1 Sequence Name  Y47H9C.8.1
Length (nt)  1275   Chromosome Location  I: 11893931-11896284
Chromosome . Primary Identifier  I Chromosome Location . Start  11893931
Chromosome Location . End  11896284 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9C.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012951 Y47H9C.8 Y47H9C.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H9C.8 Y47H9C.8 1170   I: 11893999-11894041

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9C.8.1 11893931 11896284 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31144   111   I: 11893931-11894041 Caenorhabditis elegans
Exon31145   81   I: 11894099-11894179 Caenorhabditis elegans
Exon31146   233   I: 11894242-11894474 Caenorhabditis elegans
Exon31147   267   I: 11894541-11894807 Caenorhabditis elegans
Exon31148   109   I: 11894869-11894977 Caenorhabditis elegans
Exon31149   76   I: 11895603-11895678 Caenorhabditis elegans
Exon31150   114   I: 11895731-11895844 Caenorhabditis elegans
Exon31151   58   I: 11895898-11895955 Caenorhabditis elegans
Exon31152   116   I: 11896013-11896128 Caenorhabditis elegans
Exon31153   110   I: 11896175-11896284 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9C.8.1 11893931 11896284 1

1 Sequence

Length
1275

1 Sequence Ontology Term

Identifier Name Description
transcript