WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47H9C.12.1 Sequence Name  Y47H9C.12.1
Length (nt)  737   Chromosome Location  I: 11896674-11897547
Chromosome . Primary Identifier  I Chromosome Location . Start  11896674
Chromosome Location . End  11897547 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9C.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012955 Y47H9C.12 Y47H9C.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H9C.12 Y47H9C.12 219   I: 11896701-11896762

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9C.12.1 11896674 11897547 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31154   89   I: 11896674-11896762 Caenorhabditis elegans
Exon31155   211   I: 11896809-11897019 Caenorhabditis elegans
Exon31156   84   I: 11897064-11897147 Caenorhabditis elegans
Exon31158   353   I: 11897195-11897547 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9C.12.1 11896674 11897547 1

1 Sequence

Length
737

1 Sequence Ontology Term

Identifier Name Description
transcript