WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47H9C.6a Sequence Name  Y47H9C.6a
Length (nt)  420   Chromosome Location  I: 11888784-11888840
Chromosome . Primary Identifier  I Chromosome Location . Start  11888784
Chromosome Location . End  11888840
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9C.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27635 CSP-3, isoform a 16.4 139 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056851
WBRNAi00058345
WBRNAi00004667

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47H9C.6a 11888784 11888840 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000821 csp-3 Y47H9C.6 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47H9C.6a 11888784 11888840 -1
CDS:Y47H9C.6a 11888883 11889119 -1
CDS:Y47H9C.6a 11889164 11889289 -1

1 Sequence

Length
420

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47H9C.6a.1 Y47H9C.6a.1 703   I: 11888503-11889340