WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47H9C.9.1 Sequence Name  Y47H9C.9.1
Length (nt)  2550   Chromosome Location  I: 11898789-11901476
Chromosome . Primary Identifier  I Chromosome Location . Start  11898789
Chromosome Location . End  11901476 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H9C.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012952 Y47H9C.9 Y47H9C.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H9C.9 Y47H9C.9 2550   I: 11898789-11899064

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9C.9.1 11898789 11901476 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31164   276   I: 11898789-11899064 Caenorhabditis elegans
Exon31165   313   I: 11899112-11899424 Caenorhabditis elegans
Exon31166   1751   I: 11899471-11901221 Caenorhabditis elegans
Exon31167   210   I: 11901267-11901476 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47H9C.9.1 11898789 11901476 -1

1 Sequence

Length
2550

1 Sequence Ontology Term

Identifier Name Description
transcript