WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09B3.4.1 Sequence Name  R09B3.4.1
Length (nt)  688   Chromosome Location  I: 11911320-11912053
Chromosome . Primary Identifier  I Chromosome Location . Start  11911320
Chromosome Location . End  11912053 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09B3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006707 ubc-12 R09B3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09B3.4 R09B3.4 543   I: 11911327-11911420

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09B3.4.1 11911320 11912053 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31201   101   I: 11911320-11911420 Caenorhabditis elegans
Exon31202   587   I: 11911467-11912053 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09B3.4.1 11911320 11912053 1

1 Sequence

Length
688

1 Sequence Ontology Term

Identifier Name Description
transcript