WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R06C1.3a Sequence Name  R06C1.3a
Length (nt)  1407   Chromosome Location  I: 11925275-11925535
Chromosome . Primary Identifier  I Chromosome Location . Start  11925275
Chromosome Location . End  11925535
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06C1.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36188 WVE-1, isoform a 51.1 468 Caenorhabditis elegans
 

Other

42 RNAi

WormBase ID
WBRNAi00107860
WBRNAi00026038
WBRNAi00108184
WBRNAi00051379
WBRNAi00026039
WBRNAi00034656
WBRNAi00074611
WBRNAi00074615
WBRNAi00074614
WBRNAi00072593
WBRNAi00074610
WBRNAi00074613
WBRNAi00074612
WBRNAi00004056
WBRNAi00078874
WBRNAi00092367
WBRNAi00082942
WBRNAi00078875
WBRNAi00082945
WBRNAi00082949
WBRNAi00082948
WBRNAi00077385
WBRNAi00077387
WBRNAi00077386
WBRNAi00077389
WBRNAi00077388
WBRNAi00080224
WBRNAi00080227
WBRNAi00077390
WBRNAi00080226

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R06C1.3a 11925275 11925535 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006958 wve-1 R06C1.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:R06C1.3a 11925275 11925535 -1
CDS:R06C1.3a 11925706 11925783 -1
CDS:R06C1.3a 11927121 11927447 -1
CDS:R06C1.3a 11928718 11929321 -1
CDS:R06C1.3a 11929371 11929507 -1

1 Sequence

Length
1407

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R06C1.3a.1 R06C1.3a.1 2150   I: 11924541-11929516