WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014586 Gene Name  rte-2
Sequence Name  ? Y53C10A.t2 Organism  Caenorhabditis elegans
Biotype  SO:0001272 Genetic Position  I :13.0163 ±0.000618
Length (nt)  ? 72
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014586

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53C10A.t2 Y53C10A.t2 72   I: 11978764-11978835
 

Other

0 CDSs

0 RNAi Result

8 Allele

Public Name
gk962706
gk963849
gk962859
gk964175
gk963906
qm210
gk964239
gk662518

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00014586 11978764 11978835 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts depleted in purified oocyte P bodies comparing to in whole oocytes. DESeq2, FDR < 0.05, fold change > 2. WBPaper00065975:P-body_vs_oocyte_depleted
  Transcripts depleted in purified oocyte P bodies comparing to in the whole animal. DESeq2, FDR < 0.05, fold change > 2. WBPaper00065975:P-body_vs_WholeAnimal_depleted

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00014586 11978764 11978835 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
72

1 Sequence Ontology Term