WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53C10A.5 Sequence Name  Y53C10A.5
Length (nt)  960   Chromosome Location  I: 11998782-11998873
Chromosome . Primary Identifier  I Chromosome Location . Start  11998782
Chromosome Location . End  11998873
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C10A.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22373 TMEM-189 36.6 319 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002157
WBRNAi00057246
WBRNAi00004710

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53C10A.5 11998782 11998873 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013136 tmem-189 Y53C10A.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53C10A.5 11998782 11998873 1
CDS:Y53C10A.5 11999025 11999203 1
CDS:Y53C10A.5 11999733 11999831 1
CDS:Y53C10A.5 11999904 12000232 1
CDS:Y53C10A.5 12001218 12001310 1
CDS:Y53C10A.5 12001364 12001439 1
CDS:Y53C10A.5 12002273 12002364 1

1 Sequence

Length
960

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53C10A.5.1 Y53C10A.5.1 1209   I: 11998781-12002612