WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47H10A.1.1 Sequence Name  Y47H10A.1.1
Length (nt)  2378   Chromosome Location  I: 12073072-12084225
Chromosome . Primary Identifier  I Chromosome Location . Start  12073072
Chromosome Location . End  12084225 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47H10A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000544 clp-3 Y47H10A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47H10A.1 Y47H10A.1 2259   I: 12073175-12073241

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47H10A.1.1 12073072 12084225 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31468   170   I: 12073072-12073241 Caenorhabditis elegans
Exon31469   467   I: 12073936-12074402 Caenorhabditis elegans
Exon31470   243   I: 12074703-12074945 Caenorhabditis elegans
Exon31475   277   I: 12080377-12080653 Caenorhabditis elegans
Exon31476   388   I: 12081638-12082025 Caenorhabditis elegans
Exon31477   411   I: 12082101-12082511 Caenorhabditis elegans
Exon31478   132   I: 12082820-12082951 Caenorhabditis elegans
Exon31479   84   I: 12083059-12083142 Caenorhabditis elegans
Exon31481   87   I: 12083572-12083658 Caenorhabditis elegans
Exon31482   84   I: 12084040-12084123 Caenorhabditis elegans
Exon31483   35   I: 12084191-12084225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47H10A.1.1 12073072 12084225 -1

1 Sequence

Length
2378

1 Sequence Ontology Term

Identifier Name Description
transcript