WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01G12.12.2 Sequence Name  M01G12.12.2
Length (nt)  4811   Chromosome Location  I: 12098664-12105996
Chromosome . Primary Identifier  I Chromosome Location . Start  12098664
Chromosome Location . End  12105996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01G12.12.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004509 rrf-2 M01G12.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01G12.12 M01G12.12 4740   I: 12098716-12098876

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01G12.12.2 12098664 12105996 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31507   213   I: 12098664-12098876 Caenorhabditis elegans
Exon31510   108   I: 12098922-12099029 Caenorhabditis elegans
Exon31512   250   I: 12099430-12099679 Caenorhabditis elegans
Exon31514   530   I: 12099842-12100371 Caenorhabditis elegans
Exon31516   136   I: 12100503-12100638 Caenorhabditis elegans
Exon31518   180   I: 12100684-12100863 Caenorhabditis elegans
Exon31520   272   I: 12101191-12101462 Caenorhabditis elegans
Exon31522   202   I: 12101521-12101722 Caenorhabditis elegans
Exon31524   458   I: 12101774-12102231 Caenorhabditis elegans
Exon31526   112   I: 12102291-12102402 Caenorhabditis elegans
Exon31528   363   I: 12102462-12102824 Caenorhabditis elegans
Exon31530   180   I: 12102871-12103050 Caenorhabditis elegans
Exon31532   528   I: 12103096-12103623 Caenorhabditis elegans
Exon31534   267   I: 12103683-12103949 Caenorhabditis elegans
Exon31536   174   I: 12104013-12104186 Caenorhabditis elegans
Exon31538   147   I: 12104443-12104589 Caenorhabditis elegans
Exon31540   123   I: 12104632-12104754 Caenorhabditis elegans
Exon31542   285   I: 12104816-12105100 Caenorhabditis elegans
Exon31544   159   I: 12105161-12105319 Caenorhabditis elegans
Exon31546   124   I: 12105873-12105996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01G12.12.2 12098664 12105996 -1

1 Sequence

Length
4811

1 Sequence Ontology Term

Identifier Name Description
transcript