WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15H9.3.1 Sequence Name  F15H9.3.1
Length (nt)  1050   Chromosome Location  I: 12144007-12146977
Chromosome . Primary Identifier  I Chromosome Location . Start  12144007
Chromosome Location . End  12146977 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15H9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005529 sri-17 F15H9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15H9.3 F15H9.3 1050   I: 12144007-12144171

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15H9.3.1 12144007 12146977 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31577   165   I: 12144007-12144171 Caenorhabditis elegans
Exon31579   210   I: 12145432-12145641 Caenorhabditis elegans
Exon31580   138   I: 12145685-12145822 Caenorhabditis elegans
Exon31581   122   I: 12145874-12145995 Caenorhabditis elegans
Exon31582   197   I: 12146049-12146245 Caenorhabditis elegans
Exon31583   121   I: 12146709-12146829 Caenorhabditis elegans
Exon31584   97   I: 12146881-12146977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15H9.3.1 12144007 12146977 1

1 Sequence

Length
1050

1 Sequence Ontology Term

Identifier Name Description
transcript