WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01G12.13.1 Sequence Name  M01G12.13.1
Length (nt)  1026   Chromosome Location  I: 12140560-12142757
Chromosome . Primary Identifier  I Chromosome Location . Start  12140560
Chromosome Location . End  12142757 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01G12.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005525 sri-13 M01G12.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01G12.13 M01G12.13 1026   I: 12140560-12140724

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01G12.13.1 12140560 12142757 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31595   165   I: 12140560-12140724 Caenorhabditis elegans
Exon31596   219   I: 12141191-12141409 Caenorhabditis elegans
Exon31597   129   I: 12141459-12141587 Caenorhabditis elegans
Exon31598   122   I: 12141827-12141948 Caenorhabditis elegans
Exon31599   197   I: 12142000-12142196 Caenorhabditis elegans
Exon31600   121   I: 12142520-12142640 Caenorhabditis elegans
Exon31601   73   I: 12142685-12142757 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01G12.13.1 12140560 12142757 1

1 Sequence

Length
1026

1 Sequence Ontology Term

Identifier Name Description
transcript