WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15H9.2.1 Sequence Name  F15H9.2.1
Length (nt)  1561   Chromosome Location  I: 12148809-12154333
Chromosome . Primary Identifier  I Chromosome Location . Start  12148809
Chromosome Location . End  12154333 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15H9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005527 sri-15 F15H9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15H9.2 F15H9.2 1056   I: 12151021-12151135

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F15H9.2.1 12148809 12154333 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31589   44   I: 12148809-12148852 Caenorhabditis elegans
Exon31591   70   I: 12148965-12149034 Caenorhabditis elegans
Exon31596   167   I: 12150577-12150743 Caenorhabditis elegans
Exon31597   339   I: 12150797-12151135 Caenorhabditis elegans
Exon31598   121   I: 12151180-12151300 Caenorhabditis elegans
Exon31599   197   I: 12152834-12153030 Caenorhabditis elegans
Exon31600   122   I: 12153082-12153203 Caenorhabditis elegans
Exon31601   129   I: 12153271-12153399 Caenorhabditis elegans
Exon31602   207   I: 12153491-12153697 Caenorhabditis elegans
Exon31603   165   I: 12154169-12154333 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F15H9.2.1 12148809 12154333 -1

1 Sequence

Length
1561

1 Sequence Ontology Term

Identifier Name Description
transcript