WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D7.1.1 Sequence Name  R05D7.1.1
Length (nt)  592   Chromosome Location  I: 12162399-12163703
Chromosome . Primary Identifier  I Chromosome Location . Start  12162399
Chromosome Location . End  12163703 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011026 R05D7.1 R05D7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D7.1 R05D7.1 429   I: 12162454-12162522

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05D7.1.1 12162399 12163703 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31619   124   I: 12162399-12162522 Caenorhabditis elegans
Exon31620   101   I: 12162576-12162676 Caenorhabditis elegans
Exon31622   205   I: 12162985-12163189 Caenorhabditis elegans
Exon31624   66   I: 12163468-12163533 Caenorhabditis elegans
Exon31626   96   I: 12163608-12163703 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05D7.1.1 12162399 12163703 -1

1 Sequence

Length
592

1 Sequence Ontology Term

Identifier Name Description
transcript