WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R05D7.5c Sequence Name  R05D7.5c
Length (nt)  717   Chromosome Location  I: 12186216-12186251
Chromosome . Primary Identifier  I Chromosome Location . Start  12186216
Chromosome Location . End  12186251
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D7.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51765 NSPH-1.2, isoform c 26.8 238 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051297
WBRNAi00034608
WBRNAi00004052

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R05D7.5c 12186216 12186251 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011030 nsph-1.2 R05D7.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:R05D7.5c 12186216 12186251 1
CDS:R05D7.5c 12186297 12186395 1
CDS:R05D7.5c 12186767 12186906 1
CDS:R05D7.5c 12187071 12187244 1
CDS:R05D7.5c 12187296 12187398 1
CDS:R05D7.5c 12187536 12187625 1
CDS:R05D7.5c 12188668 12188742 1

1 Sequence

Length
717

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R05D7.5c.1 R05D7.5c.1 717   I: 12186216-12188742