WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05D7.7.1 Sequence Name  R05D7.7.1
Length (nt)  351   Chromosome Location  I: 12189521-12190218
Chromosome . Primary Identifier  I Chromosome Location . Start  12189521
Chromosome Location . End  12190218 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D7.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00077559 R05D7.7 R05D7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D7.7 R05D7.7 318   I: 12189602-12189814

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05D7.7.1 12189521 12190218 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31726   9   I: 12189521-12189529 Caenorhabditis elegans
Exon31728   221   I: 12189594-12189814 Caenorhabditis elegans
Exon31729   121   I: 12190098-12190218 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05D7.7.1 12189521 12190218 -1

1 Sequence

Length
351

1 Sequence Ontology Term

Identifier Name Description
transcript