WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14B6.5.1 Sequence Name  F14B6.5.1
Length (nt)  2019   Chromosome Location  I: 12239160-12241808
Chromosome . Primary Identifier  I Chromosome Location . Start  12239160
Chromosome Location . End  12241808 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14B6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008786 oac-16 F14B6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14B6.5 F14B6.5 2019   I: 12239160-12239284

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14B6.5.1 12239160 12241808 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31799   125   I: 12239160-12239284 Caenorhabditis elegans
Exon31800   265   I: 12239341-12239605 Caenorhabditis elegans
Exon31801   139   I: 12239661-12239799 Caenorhabditis elegans
Exon31802   87   I: 12239844-12239930 Caenorhabditis elegans
Exon31803   211   I: 12239982-12240192 Caenorhabditis elegans
Exon31804   167   I: 12240356-12240522 Caenorhabditis elegans
Exon31805   314   I: 12240587-12240900 Caenorhabditis elegans
Exon31806   127   I: 12240945-12241071 Caenorhabditis elegans
Exon31807   115   I: 12241123-12241237 Caenorhabditis elegans
Exon31808   205   I: 12241286-12241490 Caenorhabditis elegans
Exon31809   264   I: 12241545-12241808 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14B6.5.1 12239160 12241808 1

1 Sequence

Length
2019

1 Sequence Ontology Term

Identifier Name Description
transcript