WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41D3.1.1 Sequence Name  F41D3.1.1
Length (nt)  1008   Chromosome Location  I: 12245456-12246778
Chromosome . Primary Identifier  I Chromosome Location . Start  12245456
Chromosome Location . End  12246778 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41D3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003672 nhr-82 F41D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41D3.1 F41D3.1 981   I: 12245456-12245480

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41D3.1.1 12245456 12246778 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31810   25   I: 12245456-12245480 Caenorhabditis elegans
Exon31811   144   I: 12245601-12245744 Caenorhabditis elegans
Exon31812   66   I: 12245790-12245855 Caenorhabditis elegans
Exon31813   185   I: 12245910-12246094 Caenorhabditis elegans
Exon31814   432   I: 12246144-12246575 Caenorhabditis elegans
Exon31815   156   I: 12246623-12246778 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41D3.1.1 12245456 12246778 1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
transcript