WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41D3.3.1 Sequence Name  F41D3.3.1
Length (nt)  1129   Chromosome Location  I: 12251906-12253636
Chromosome . Primary Identifier  I Chromosome Location . Start  12251906
Chromosome Location . End  12253636 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41D3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009608 nhr-265 F41D3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41D3.3 F41D3.3 1047   I: 12251906-12251924

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41D3.3.1 12251906 12253636 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31825   19   I: 12251906-12251924 Caenorhabditis elegans
Exon31826   228   I: 12251976-12252203 Caenorhabditis elegans
Exon31827   221   I: 12252259-12252479 Caenorhabditis elegans
Exon31828   254   I: 12252821-12253074 Caenorhabditis elegans
Exon31829   202   I: 12253120-12253321 Caenorhabditis elegans
Exon31830   75   I: 12253380-12253454 Caenorhabditis elegans
Exon31831   130   I: 12253507-12253636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41D3.3.1 12251906 12253636 1

1 Sequence

Length
1129

1 Sequence Ontology Term

Identifier Name Description
transcript