WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41D3.4.1 Sequence Name  F41D3.4.1
Length (nt)  2031   Chromosome Location  I: 12254485-12257180
Chromosome . Primary Identifier  I Chromosome Location . Start  12254485
Chromosome Location . End  12257180 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41D3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009609 oac-27 F41D3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41D3.4 F41D3.4 2010   I: 12254506-12254769

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41D3.4.1 12254485 12257180 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31832   285   I: 12254485-12254769 Caenorhabditis elegans
Exon31833   211   I: 12254813-12255023 Caenorhabditis elegans
Exon31834   121   I: 12255134-12255254 Caenorhabditis elegans
Exon31835   127   I: 12255304-12255430 Caenorhabditis elegans
Exon31836   338   I: 12255473-12255810 Caenorhabditis elegans
Exon31837   167   I: 12255859-12256025 Caenorhabditis elegans
Exon31838   256   I: 12256238-12256493 Caenorhabditis elegans
Exon31839   139   I: 12256541-12256679 Caenorhabditis elegans
Exon31840   265   I: 12256732-12256996 Caenorhabditis elegans
Exon31841   122   I: 12257059-12257180 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41D3.4.1 12254485 12257180 -1

1 Sequence

Length
2031

1 Sequence Ontology Term

Identifier Name Description
transcript