WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41D3.5.1 Sequence Name  F41D3.5.1
Length (nt)  2022   Chromosome Location  I: 12259912-12262848
Chromosome . Primary Identifier  I Chromosome Location . Start  12259912
Chromosome Location . End  12262848 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41D3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009610 oac-28 F41D3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41D3.5 F41D3.5 2022   I: 12259912-12260175

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41D3.5.1 12259912 12262848 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon31844   264   I: 12259912-12260175 Caenorhabditis elegans
Exon31845   211   I: 12260221-12260431 Caenorhabditis elegans
Exon31846   115   I: 12260478-12260592 Caenorhabditis elegans
Exon31847   127   I: 12260643-12260769 Caenorhabditis elegans
Exon31848   320   I: 12260826-12261145 Caenorhabditis elegans
Exon31849   167   I: 12261610-12261776 Caenorhabditis elegans
Exon31850   202   I: 12261825-12262026 Caenorhabditis elegans
Exon31851   87   I: 12262082-12262168 Caenorhabditis elegans
Exon31852   139   I: 12262219-12262357 Caenorhabditis elegans
Exon31853   265   I: 12262406-12262670 Caenorhabditis elegans
Exon31854   125   I: 12262724-12262848 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41D3.5.1 12259912 12262848 -1

1 Sequence

Length
2022

1 Sequence Ontology Term

Identifier Name Description
transcript